Sequence Similarity Clusters for the Entities in PDB 1CVU

Entity #1 | Chains: A,B
PROSTAGLANDIN H2 SYNTHASE-2 protein, length: 552 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30747
95 % 22 44 285 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 22 44 293
70 % 27 51 293
50 % 30 82 226
40 % 30 82 246
30 % 30 82 255
Entity #2 | Chains: F
PROTEIN (9-MER) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.