Sequence Similarity Clusters for the Entities in PDB 1CVS

Entity #1 | Chains: A,B
FIBROBLAST GROWTH FACTOR 2 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 15 1632
95 % 16 20 1737 Flexibility: No
Max RMSD: 1.8, Avg RMSD: 0.4
PDBFlex
90 % 16 20 1773
70 % 16 20 1797
50 % 95 125 161
40 % 96 126 178
30 % 97 127 190
Entity #2 | Chains: C,D
FIBROBLAST GROWTH FACTOR RECEPTOR 1 protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 12715
95 % 3 5 7715 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.0
PDBFlex
90 % 3 5 7673
70 % 10 15 1838
50 % 10 15 1866
40 % 10 15 1873
30 % 10 15 1810

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.