Sequence Similarity Clusters for the Entities in PDB 1CVR

Entity #1 | Chains: A
GINGIPAIN R protein, length: 435 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57566
95 % 1 2 15138 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 1 2 14832
70 % 1 2 13883
50 % 1 2 12272
40 % 1 2 11019
30 % 1 2 9457

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures