Sequence Similarity Clusters for the Entities in PDB 1CVO

Entity #1 | Chains: A
CARDIOTOXIN V protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26207
95 % 2 2 23426
90 % 2 2 22667
70 % 2 2 20642
50 % 32 33 1179
40 % 120 126 325
30 % 128 134 302

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1TGX 1 A, B, C GAMMA-CARDIOTOXIN 8654
2 1UG4 1 A Cytotoxin 6 8656
3 1H0J 1 A, B, C CARDIOTOXIN-3 SODIUM DODECYL SULFATE 8656
4 1KXI 1 A, B CARDIOTOXIN V 8656
5 2BHI 1 A, B CYTOTOXIN 3 8656
6 1CDT 1 A, B CARDIOTOXIN VII4 8644
7 1XT3 1 A, B Cytotoxin 3 8656
8 3PLC 1 A, B, C Beta-cardiotoxin OH-27 8665
9 4OM5 1 A, B, C, D Cytotoxin 4 UNP residues 22-81 8656
10 3VTS 1 A, B Cytotoxin 1 8626
11 4OM4 1 A, B, C, D, E Cytotoxin 2 UNP residues 22-81 8656
12 5NQ4 1 A Cytotoxin 1 8657
13 5NPN 1 A Cytotoxin 1 8657
14 5LUE 1 A VC-1=CYTOTOXIN 8657
15 5T8A 1 A Cytotoxin 1 This toxin features the presence of an additional Met-residue at the N-terminus, compared to the native toxin, isolated from cobra venom 8657
16 1ZAD 1 A Cytotoxin 1 8657
17 1RL5 1 A Cytotoxin 1 8657
18 1I02 1 A CARDIOTOXIN-3 8656
19 1FFJ 1 A CYTOTOXIN 2 1 8657
20 1CHV 1 S PROTEIN (CARDIOTOXIN ANALOGUE V) 8656
21 1CCQ 1 A PROTEIN (CYTOTOXIN 2) 8657
22 1CB9 1 A PROTEIN (CYTOTOXIN 2) 8657
23 1KBS 1 A CTX IV 8656
24 1KBT 1 A CTX IV 8656
25 1CXO 1 A CARDIOTOXIN GAMMA 8654
26 2CDX 1 A CARDIOTOXIN CTX I 8656
27 1CXN 1 A CARDIOTOXIN GAMMA 8654
28 1CRE 1 A CARDIOTOXIN II 8656
29 1CRF 1 A CARDIOTOXIN II 8656
30 2CRS 1 A CARDIOTOXIN III 8656
31 2CRT 1 A CARDIOTOXIN III 8656
32 1CVO 1 A CARDIOTOXIN V 8656
33 2CCX 1 A CARDIOTOXIN CTX IIB 8644