Sequence Similarity Clusters for the Entities in PDB 1CVO

Entity #1 | Chains: A
CARDIOTOXIN V protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 27285
95 % 2 2 25704
90 % 2 2 24800
70 % 2 2 22427
50 % 32 33 1220
40 % 120 126 362
30 % 128 134 318

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1V6P 1 A, B Cobrotoxin 8656
2 1VB0 1 A Cobrotoxin b 8656
3 1F94 1 A BUCANDIN 92438
4 3NDS 1 A Short neurotoxin 1 ENGINEERED TOXIN ALPHA 8658
5 3NEQ 1 A, B Three-finger muscarinic toxin 7 8618
6 3EBX 1 A ERABUTOXIN B 8631
7 3FEV 1 A, B, C Fusion of Muscarinic toxin 1, Muscarinic m1-toxin1 8618
8 2VLW 1 A, B MUSCARINIC M1-TOXIN1 DI-IODO TYROSINE AT POSITION 51 8618
9 1QKD 1 A, B ERABUTOXIN A 8631
10 1QKE 1 A ERABUTOXIN A 8631
11 1TGX 1 A, B, C GAMMA-CARDIOTOXIN 8654
12 1ONJ 1 A Cobrotoxin b 8656
13 1FF4 1 A MUSCARINIC TOXIN/ACETYLCHOLINE RECEPTOR BINDING PROTEIN 8618
14 3HH7 1 A, B Muscarinic toxin-like protein 3 homolog 8665
15 5DO6 1 A, B Mambalgin-1 Mambalgin-1 T23A mutant UNP residues 22-78 8624
16 3ERA 1 A, B ERABUTOXIN A 8631
17 1FAS 1 A FASCICULIN 1 8618
18 6EBX 1 A, B ERABUTOXIN B 8631
19 4LFT 1 A, B Alpha-elapitoxin-Dpp2a unp residues 65-136 8624
20 1UG4 1 A Cytotoxin 6 8656
21 5DU1 1 A, B, C, D Mambalgin-1 wild-type sequence 8624
22 2ERA 1 A ERABUTOXIN A 8631
23 1IQ9 1 A alpha-neurotoxin 8654
24 4DO8 1 A, B Muscarinic toxin 1 Muscarinic toxin 1 8618
25 1HC9 1 A ALPHA-BUNGAROTOXIN ISOFORM V31 ALPHA-NEUROTOXIN 8616
26 1HC9 2 B ALPHA-BUNGAROTOXIN ISOFORM A31 8616
27 5MG9 1 A AncTx1-W28R/I38S Putative ancetral mamba toxin, Residues 1 to 6 (LEU THR CYS VAL LYS SER ) match to UNP Q8QGR0 NXM11_DENAN 22 to 28, Residues 7 to 11 (LYS SER ILE PHE GLY ) match to UNP P85092 TXAD1_DENAN 7 to 11, Residues 12 to 17 (VAL THR THR GLU ASP CYS ) match to UNP P18328 TXM2_DENAN 12 to 17, Residues 18 to 26 (PRO ASP GLY GLN ASN LEU CYS PHE LYS ) match to UNP P81030 TXM1_DENAN 18 to 26, Residues 27 to 31 (ARG ARG HIS TYR ILE ) match to UNP P86419 3SI1B_DENAN 27 to 31, Residues 32 to 34 (VAL PRO LYS ) match to UNP P85092 TXAD1_DENAN 32 to 34, Residues 35 to 37 (MET TYR ASP ) match to UNP Q8QGR0 NXM11_DENAN 56 to 58, Residues 38 to 48 (SER THR ARG GLY CYS ALA ALA THR CYS PRO ILE ) match to UNP P85092 TXAD1_DENAN 38 to 48, Residues 49 to 50 (ALA GLU ) match to UNP Q8QGR0 NXM11_DENAN 61 to 62, Residues 51 to 54 (ASN ARG ASP VAL ) match to UNP P82462 3SUC1_NAJKA 51 to 54, Residues 55 to 58 (ILE HIS CYS CYS ) match to UNP P85092 TXAD1_DENAN 55 to 58, Residues 59 to 62 (GLY THR ASP LYS ) match to UNP P18328 TXM2_DENAN 59 to 62, Residues 63 to 65 (CYS ASN GLU ) match to UNP P85092 TXAD1_DENAN 63 to 65, 8618
28 4IYE 1 A Toxin AdTx1 Rho-Da1a 8618
29 1NTN 1 A NEUROTOXIN I 8657
30 5EBX 1 A ERABUTOXIN A 8631
31 5DZ5 1 A, B Mambalgin-1 8624
32 1FSC 1 A FASCICULIN 2 8618
33 4RUD 1 A, B Three-finger toxin 3b UNP residues 22-79 8637
34 2QC1 1 A Alpha-bungarotoxin 8616
35 1H0J 1 A, B, C CARDIOTOXIN-3 SODIUM DODECYL SULFATE 8656
36 4AEA 1 A, B LONG NEUROTOXIN 1 8649
37 1QM7 1 A R-CHII FULLY ENGINEERED PROTEIN CONTAINING 41% RESIDUES FROM FASCICULIN 2,25% FROM ALPHA-TOXIN, 34% CONSERVED BETWEEN THE TWO NATURAL TOXINS 32630
38 2H8U 1 A, B Bucain 92438
39 1KXI 1 A, B CARDIOTOXIN V 8656
40 1KBA 1 A, B KAPPA-BUNGAROTOXIN 8616
41 2CTX 1 A ALPHA-COBRATOXIN 35670
42 2BHI 1 A, B CYTOTOXIN 3 8656
43 1CDT 1 A, B CARDIOTOXIN VII4 8644
44 4EY8 2 B Fasciculin-2 8618
45 1XT3 1 A, B Cytotoxin 3 8656
46 3PLC 1 A, B, C Beta-cardiotoxin OH-27 8665
47 4OM5 1 A, B, C, D Cytotoxin 4 UNP residues 22-81 8656
48 3VTS 1 A, B Cytotoxin 1 8626
49 1KU6 2 B FASCICULIN 2 8618
50 5HBT 4 A Alpha-bungarotoxin isoform V31 UNP residues 22-95 8616
51 4OM4 1 A, B, C, D, E Cytotoxin 2 UNP residues 22-81 8656
52 4BDT 2 B FASCICULIN-2 8618
53 2ABX 1 A, B ALPHA-BUNGAROTOXIN 8616
54 1F8U 2 B FASCICULIN II 8618
55 2X8B 2 B FASCICULIN-2 8618
56 1B41 2 B FASCICULIN-2 SINGLE DOMAIN 8618
57 5HBV 1 A Alpha-bungarotoxin isoform V31 UNP residues 22-95 8616
58 1MAH 2 F FASCICULIN 2 8618
59 4ZQY 1 A, B, C Ringhalexin 8626
60 4UY2 2 C, D ALPHA-BUNGAROTOXIN ISOFORM V31 8616
61 1FSS 2 B FASCICULIN II 8618
62 4HQP 2 F, G, H, I, J Alpha-bungarotoxin isoform V31 8616
63 1YI5 2 F, G, H, I, J Long neurotoxin 1 84476
64 5NQ4 1 A Cytotoxin 1 8657
65 5NPN 1 A Cytotoxin 1 8657
66 5LUE 1 A VC-1=CYTOTOXIN 8657
67 5T8A 1 A Cytotoxin 1 This toxin features the presence of an additional Met-residue at the N-terminus, compared to the native toxin, isolated from cobra venom 8657
68 2MJY 1 A Mambalgin-1 8624
69 2MJ4 1 A Short neurotoxin 1 8657
70 2MJ0 1 A Weak tryptophan-containing neurotoxin 8649
71 2MFA 1 A Mambalgin-2 8624
72 2LA1 1 A Mambin 8623
73 2JQP 1 A Weak toxin 1 sequence database residues 22-86 92438
74 1ZAD 1 A Cytotoxin 1 8657
75 1W6B 1 A LONG NEUROTOXIN 1 8657
76 1VYC 1 A BUCAIN BELONGS TO THE SNAKE TOXIN FAMILY, ORPHAN GROUP III SUBFAMILY 92438
77 1RL5 1 A Cytotoxin 1 8657
78 1RGJ 1 A long neurotoxin 1 8616
79 1MR6 1 A neurotoxin 8616
80 1LXG 1 A Long neurotoxin 1 8649
81 1LXH 1 A LONG NEUROTOXIN 1 8649
82 1LJZ 1 A alpha-Bungarotoxin 8616
83 1L4W 1 A alpha-Bungarotoxin 8616
84 1KL8 1 A ALPHA-BUNGAROTOXIN 8616
85 1KFH 1 A alpha-Bungarotoxin 8616
86 1KC4 1 A alpha-bungarotoxin 8616
87 1JGK 1 A CANDOXIN 92438
88 1JE9 1 A SHORT NEUROTOXIN II 8649
89 1JBD 1 A LONG NEUROTOXIN 1 8616
90 1IK8 1 A LONG NEUROTOXIN 1 8616
91 1IKC 1 A long neurotoxin 1 8616
92 1IJC 1 A bucandin 92438
93 1HAA 1 A ALPHA-BUNGAROTOXIN ALPHA-NEUROTOXIN 8616
94 1HAJ 1 A ALPHA-BUNGAROTOXIN ALPHA-NEUROTOXIN 8616
95 1IDG 1 A ALPHA-BUNGAROTOXIN 8616
96 1IDH 1 A ALPHA-BUNGAROTOXIN 8616
97 1IDI 1 A ALPHA-BUNGAROTOXIN 8616
98 1IDL 1 A ALPHA-BUNGAROTOXIN 8616
99 1I02 1 A CARDIOTOXIN-3 8656
100 1HOY 1 A LONG NEUROTOXIN 1 8616
101 1G6M 1 A SHORT NEUROTOXIN 1 8649
102 1FFJ 1 A CYTOTOXIN 2 1 8657
103 1CHV 1 S PROTEIN (CARDIOTOXIN ANALOGUE V) 8656
104 1CCQ 1 A PROTEIN (CYTOTOXIN 2) 8657
105 1CB9 1 A PROTEIN (CYTOTOXIN 2) 8657
106 1BXP 1 A ALPHA-BUNGAROTOXIN 8616
107 2BTX 1 A ALPHA-BUNGAROTOXIN 8616
108 2NBT 1 A, B NEURONAL BUNGAROTOXIN 8616
109 1KBS 1 A CTX IV 8656
110 1KBT 1 A CTX IV 8656
111 1TXA 1 A TOXIN B 8665
112 1TXB 1 A TOXIN B 8665
113 1LSI 1 A LSIII 8631
114 1TFS 1 A TOXIN FS2 8624
115 1CXO 1 A CARDIOTOXIN GAMMA 8654
116 1DRS 1 A DENDROASPIN 8623
117 2CDX 1 A CARDIOTOXIN CTX I 8656
118 1CXN 1 A CARDIOTOXIN GAMMA 8654
119 1COD 1 A COBROTOXIN 8656
120 1COE 1 A COBROTOXIN 8656
121 1ERA 1 A ERABUTOXIN B 8631
122 1FRA 1 A ERABUTOXIN B 8631
123 1CRE 1 A CARDIOTOXIN II 8656
124 1CRF 1 A CARDIOTOXIN II 8656
125 2CRS 1 A CARDIOTOXIN III 8656
126 2CRT 1 A CARDIOTOXIN III 8656
127 1ABT 1 A ALPHA-BUNGAROTOXIN 8616
128 1CVO 1 A CARDIOTOXIN V 8656
129 1NOR 1 A NEUROTOXIN II 8657
130 2CCX 1 A CARDIOTOXIN CTX IIB 8644
131 1NEA 1 A TOXIN ALPHA 8654
132 1NTX 1 A ALPHA-NEUROTOXIN 8624
133 1CTX 1 A ALPHA-COBRATOXIN 84476
134 1NXB 1 A NEUROTOXIN B 8631