Sequence Similarity Clusters for the Entities in PDB 1CUL

Entity #1 | Chains: A
TYPE V ADENYLYL CYCLASE protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 16 3251
95 % 2 16 4011 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 2 16 4039
70 % 2 16 3971
50 % 2 16 3850
40 % 2 16 3680
30 % 2 16 3423
Entity #2 | Chains: B
TYPE II ADENYLYL CYCLASE protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 17 2750
95 % 3 17 3445 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.9
PDBFlex
90 % 3 17 3493
70 % 3 17 3439
50 % 3 17 3361
40 % 3 17 3253
30 % 8 22 2193
Entity #3 | Chains: C
GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) protein, length: 380 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52204
95 % 3 20 2819 Flexibility: Low
Max RMSD: 18.4, Avg RMSD: 2.5
PDBFlex
90 % 3 20 2864
70 % 3 20 2834
50 % 3 20 2808
40 % 40 97 343
30 % 41 99 335

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.