Sequence Similarity Clusters for the Entities in PDB 1CUL

Entity #1 | Chains: A
TYPE V ADENYLYL CYCLASE protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 16 3749
95 % 2 16 4113 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 2 16 4158
70 % 2 16 4081
50 % 2 16 3966
40 % 2 16 3756
30 % 2 16 3441
Entity #2 | Chains: B
TYPE II ADENYLYL CYCLASE protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 17 3405
95 % 3 17 3717 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.8
PDBFlex
90 % 3 17 3786
70 % 3 17 3715
50 % 3 17 3626
40 % 3 17 3456
30 % 12 26 1895
Entity #3 | Chains: C
GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) protein, length: 380 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 18440
95 % 4 22 2782 Flexibility: Low
Max RMSD: 18.4, Avg RMSD: 2.4
PDBFlex
90 % 4 22 2895
70 % 4 22 2859
50 % 4 24 2437
40 % 42 103 383
30 % 42 103 386

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures