Sequence Similarity Clusters for the Entities in PDB 1CU4

Entity #1 | Chains: L
FAB LIGHT CHAIN protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40038
95 % 40 51 683 Flexibility: Low
Max RMSD: 6.4, Avg RMSD: 1.9
PDBFlex
90 % 40 52 687
70 % 1211 2287 1
50 % 2474 4633 1
40 % 2474 4633 1
30 % 2836 5461 1
Entity #2 | Chains: H
FAB HEAVY CHAIN protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40268
95 % 2 2 30779 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 2 2 29557
70 % 1203 2244 2
50 % 2475 4633 1
40 % 2475 4633 1
30 % 2837 5461 1
Entity #3 | Chains: P
RECOGNITION PEPTIDE protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.