Sequence Similarity Clusters for the Entities in PDB 1CU4

Entity #1 | Chains: L
FAB LIGHT CHAIN protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 41221
95 % 40 52 677 Flexibility: Low
Max RMSD: 6.4, Avg RMSD: 1.8
PDBFlex
90 % 40 53 684
70 % 1297 2426 1
50 % 2647 4913 1
40 % 2647 4913 1
30 % 3027 5780 1
Entity #2 | Chains: H
FAB HEAVY CHAIN protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 41455
95 % 2 2 31618
90 % 2 2 30348
70 % 1284 2376 2
50 % 2648 4913 1
40 % 2648 4913 1
30 % 3028 5780 1
Entity #3 | Chains: P
RECOGNITION PEPTIDE protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures