Sequence Similarity Clusters for the Entities in PDB 1CU4

Entity #1 | Chains: L
FAB LIGHT CHAIN protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 38856
95 % 38 49 718 Flexibility: Low
Max RMSD: 6.4, Avg RMSD: 1.9
PDBFlex
90 % 38 50 711
70 % 983 1822 2
50 % 2418 4489 1
40 % 2418 4489 1
30 % 2766 5290 1
Entity #2 | Chains: H
FAB HEAVY CHAIN protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 39081
95 % 2 2 29875
90 % 2 2 28714
70 % 1175 2172 1
50 % 2419 4489 1
40 % 2419 4489 1
30 % 2767 5290 1
Entity #3 | Chains: P
RECOGNITION PEPTIDE protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.