Sequence Similarity Clusters for the Entities in PDB 1CTP

Entity #1 | Chains: E
cAMP-DEPENDENT PROTEIN KINASE protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 16106
95 % 220 240 129 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 0.9
PDBFlex
90 % 220 241 132
70 % 220 241 152
50 % 220 241 180
40 % 284 327 139
30 % 3561 4300 2
Entity #2 | Chains: I
cAMP-dependent protein kinase inhibitor, alpha form protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 148 153 181
95 % 148 153 228
90 % 148 153 237
70 % 148 153 268
50 % 148 153 296
40 % 148 153 326
30 % 148 153 335

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures