Sequence Similarity Clusters for the Entities in PDB 1CTP

Entity #1 | Chains: E
cAMP-DEPENDENT PROTEIN KINASE protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54728
95 % 172 192 140 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 0.9
PDBFlex
90 % 172 193 150
70 % 172 193 169
50 % 172 193 200
40 % 172 193 219
30 % 3252 3912 2
Entity #2 | Chains: I
cAMP-dependent protein kinase inhibitor, alpha form protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 116 121 199
95 % 116 121 271
90 % 142 147 236
70 % 142 147 269
50 % 142 147 294
40 % 142 147 314
30 % 142 147 319

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures