Sequence Similarity Clusters for the Entities in PDB 1CTP

Entity #1 | Chains: E
cAMP-DEPENDENT PROTEIN KINASE protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53269
95 % 172 192 137 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 0.9
PDBFlex
90 % 172 193 145
70 % 172 193 165
50 % 172 193 195
40 % 172 193 212
30 % 3137 3777 2
Entity #2 | Chains: I
cAMP-dependent protein kinase inhibitor, alpha form protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 116 121 187
95 % 116 121 259
90 % 142 147 227
70 % 142 147 259
50 % 142 147 282
40 % 142 147 299
30 % 142 147 311

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.