Sequence Similarity Clusters for the Entities in PDB 1CT8

Entity #1 | Chains: A,C
7C8 FAB FRAGMENT; SHORT CHAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41431
95 % 1 1 31590 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 21 37 1194
70 % 868 2392 1
50 % 1773 4843 1
40 % 1773 4843 1
30 % 1992 5705 1
Entity #2 | Chains: B,D
7C8 FAB FRAGMENT; LONG CHAIN protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40828
95 % 1 1 31232
90 % 1 1 30032
70 % 853 2342 2
50 % 1774 4843 1
40 % 1774 4843 1
30 % 1993 5705 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures