Sequence Similarity Clusters for the Entities in PDB 1CT8

Entity #1 | Chains: A,C
7C8 FAB FRAGMENT; SHORT CHAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40811
95 % 1 1 31130 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 21 37 1178
70 % 837 2327 1
50 % 1710 4713 1
40 % 1710 4713 1
30 % 1924 5567 1
Entity #2 | Chains: B,D
7C8 FAB FRAGMENT; LONG CHAIN protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40222
95 % 1 1 30781
90 % 1 1 29609
70 % 823 2280 2
50 % 1711 4713 1
40 % 1711 4713 1
30 % 1925 5567 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.