Sequence Similarity Clusters for the Entities in PDB 1CSO

Entity #1 | Chains: E
PROTEINASE B protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 10 7219
95 % 28 28 2077
90 % 28 28 2131
70 % 28 28 2141
50 % 66 89 530
40 % 66 89 573
30 % 66 89 577
Entity #2 | Chains: I
OVOMUCOID INHIBITOR protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 11 5232
95 % 32 42 1270 Flexibility: No
Max RMSD: 2.5, Avg RMSD: 0.4
PDBFlex
90 % 32 42 1290
70 % 33 44 1188
50 % 33 47 1175
40 % 33 48 1154
30 % 36 59 951

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures