Sequence Similarity Clusters for the Entities in PDB 1CSO

Entity #1 | Chains: E
PROTEINASE B protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 10 6637
95 % 28 28 2006
90 % 28 28 2054
70 % 28 28 2076
50 % 66 88 514
40 % 66 88 558
30 % 66 88 553
Entity #2 | Chains: I
OVOMUCOID INHIBITOR protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 74160
95 % 32 42 1231 Flexibility: No
Max RMSD: 2.5, Avg RMSD: 0.4
PDBFlex
90 % 33 44 1132
70 % 33 44 1168
50 % 33 47 1136
40 % 33 48 1136
30 % 34 49 1090

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures