Sequence Similarity Clusters for the Entities in PDB 1CS4

Entity #1 | Chains: A
TYPE V ADENYLATE CYCLASE protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 16 4318
95 % 3 16 4691 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 3 16 4717
70 % 3 16 4601
50 % 3 16 4397
40 % 3 16 4160
30 % 3 16 3767
Entity #2 | Chains: B
TYPE II ADENYLATE CYCLASE protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 17 3688
95 % 4 17 3997 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.8
PDBFlex
90 % 4 17 4055
70 % 4 17 3964
50 % 4 17 3836
40 % 4 17 3657
30 % 14 27 1353
Entity #3 | Chains: C
GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 17 3569
95 % 5 24 2627 Flexibility: Low
Max RMSD: 18.4, Avg RMSD: 2.4
PDBFlex
90 % 5 24 2736
70 % 5 24 2724
50 % 45 111 381
40 % 47 113 399
30 % 47 113 404

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures