Sequence Similarity Clusters for the Entities in PDB 1CQK

Entity #1 | Chains: A,B
CH3 DOMAIN OF MAK33 ANTIBODY protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35348
95 % 1 1 30216 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 28996
70 % 1 1 26060
50 % 2 3 11739
40 % 3 4 6478
30 % 5 11 3167

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures