Sequence Similarity Clusters for the Entities in PDB 1CQK

Entity #1 | Chains: A,B
CH3 DOMAIN OF MAK33 ANTIBODY protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36256
95 % 1 1 31002 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 29713
70 % 1 1 26623
50 % 2 3 12006
40 % 3 4 6613
30 % 5 11 3243

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures