Sequence Similarity Clusters for the Entities in PDB 1CQF

Entity #1 | Chains: A,B,C,D,E
SHIGA TOXIN B-CHAIN protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 3645
95 % 7 14 364 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 7 14 388
70 % 7 14 426
50 % 11 21 299
40 % 11 21 312
30 % 11 21 329

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.