Sequence Similarity Clusters for the Entities in PDB 1CQE

Entity #1 | Chains: A,B
PROTEIN (PROSTAGLANDIN H2 SYNTHASE-1) protein, length: 580 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 26 867
95 % 15 29 1081 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 15 29 1097
70 % 15 29 1135
50 % 58 80 226
40 % 58 80 250
30 % 58 80 258

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.