Sequence Similarity Clusters for the Entities in PDB 1CQE

Entity #1 | Chains: A,B
PROTEIN (PROSTAGLANDIN H2 SYNTHASE-1) protein, length: 580 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 29 1030
95 % 17 31 1148 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 17 31 1185
70 % 17 31 1208
50 % 63 85 259
40 % 63 85 288
30 % 63 85 300

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures