Sequence Similarity Clusters for the Entities in PDB 1CQD

Entity #1 | Chains: A,B,C,D
PROTEIN (PROTEASE II) protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 20490
95 % 1 1 18590 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 18118
70 % 1 1 16735
50 % 146 198 147
40 % 171 242 127
30 % 197 282 120

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1CQD 1 A, B, C, D PROTEIN (PROTEASE II) TETRATHIONATE ATTACHED TO CYS-27 94328