Sequence Similarity Clusters for the Entities in PDB 1CQD

Entity #1 | Chains: A,B,C,D
PROTEIN (PROTEASE II) protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19995
95 % 1 1 18134 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 17680
70 % 1 1 16358
50 % 146 198 143
40 % 171 242 125
30 % 197 282 117

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures