Sequence Similarity Clusters for the Entities in PDB 1CQD

Entity #1 | Chains: A,B,C,D
PROTEIN (PROTEASE II) protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21859
95 % 1 1 18979 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 18551
70 % 1 1 17163
50 % 146 198 142
40 % 171 241 124
30 % 197 280 115

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures