Sequence Similarity Clusters for the Entities in PDB 1CQD

Entity #1 | Chains: A,B,C,D
PROTEIN (PROTEASE II) protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21550
95 % 1 1 18728 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 18313
70 % 1 1 16957
50 % 144 195 142
40 % 167 235 126
30 % 193 274 116

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures