Sequence Similarity Clusters for the Entities in PDB 1CQ4

Entity #1 | Chains: A
PROTEIN (SERINE PROTEINASE INHIBITOR 2) protein, length: 47 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60841
95 % 1 1 49604
90 % 1 1 47068
70 % 1 1 41264
50 % 1 1 35007
40 % 1 1 30672
30 % 1 1 25618
Entity #2 | Chains: B
PROTEIN (SERINE PROTEINASE INHIBITOR 2) protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 26779
95 % 1 3 23576 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 3 22804
70 % 1 3 20778
50 % 1 3 19159
40 % 1 3 16917
30 % 1 3 14558

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures