Sequence Similarity Clusters for the Entities in PDB 1CQ3

Entity #1 | Chains: A,B
VIRAL CHEMOKINE INHIBITOR protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41138
95 % 1 1 34621 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 33086
70 % 1 4 12279
50 % 1 4 10931
40 % 1 4 9851
30 % 1 4 8416

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures