Sequence Similarity Clusters for the Entities in PDB 1CQ3

Entity #1 | Chains: A,B
VIRAL CHEMOKINE INHIBITOR protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40259
95 % 1 1 30917 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 29802
70 % 1 4 11654
50 % 1 4 10417
40 % 1 4 9445
30 % 1 4 8239

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures