Sequence Similarity Clusters for the Entities in PDB 1CPJ

Entity #1 | Chains: A,B
CATHEPSIN B protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14964
95 % 3 3 14002 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 3 3 13755
70 % 15 21 2162
50 % 18 25 1746
40 % 18 25 1734
30 % 183 282 120

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1THE 1 A, B Cathepsin B RECOMBINANT RAT ENZYME 10116 3.4.22.1 | Details
2 1CTE 1 A, B CATHEPSIN B 10116 3.4.22.1 | Details
3 1CPJ 1 A, B CATHEPSIN B 10116 3.4.22.1 | Details