Sequence Similarity Clusters for the Entities in PDB 1CPJ

Entity #1 | Chains: A,B
CATHEPSIN B protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14662
95 % 3 3 13739 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 3 3 13502
70 % 15 21 2098
50 % 18 25 1697
40 % 18 25 1688
30 % 181 282 117

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1THE 1 A, B Cathepsin B RECOMBINANT RAT ENZYME 10116 3.4.22.1 | Details
2 1CTE 1 A, B CATHEPSIN B 10116 3.4.22.1 | Details
3 1CPJ 1 A, B CATHEPSIN B 10116 3.4.22.1 | Details