Sequence Similarity Clusters for the Entities in PDB 1CPJ

Entity #1 | Chains: A,B
CATHEPSIN B protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14541
95 % 3 3 13626 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 3 3 13391
70 % 15 21 2082
50 % 18 25 1683
40 % 18 25 1675
30 % 181 282 118

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures