Sequence Similarity Clusters for the Entities in PDB 1CPJ

Entity #1 | Chains: A,B
CATHEPSIN B protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 12537
95 % 3 3 12125 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 3 3 11956
70 % 13 18 2379
50 % 16 22 1878
40 % 16 22 1882
30 % 162 248 126

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.