Sequence Similarity Clusters for the Entities in PDB 1CPI

Entity #1 | Chains: A,B
HIV-1 PROTEASE protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 5884
95 % 389 580 2
90 % 421 642 2
70 % 440 669 5
50 % 447 695 5
40 % 457 705 9
30 % 459 707 14
Entity #2 | Chains: C
CYCLIC PEPTIDE INHIBITOR protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures