Sequence Similarity Clusters for the Entities in PDB 1CPC

Entity #1 | Chains: A,K
C-PHYCOCYANIN (ALPHA SUBUNIT) protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41274
95 % 1 1 31187
90 % 1 1 29875
70 % 7 30 372
50 % 7 36 388
40 % 7 45 283
30 % 18 120 122
Entity #2 | Chains: B,L
C-PHYCOCYANIN (BETA SUBUNIT) protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40780
95 % 1 1 30863
90 % 1 1 29563
70 % 7 33 371
50 % 12 53 235
40 % 12 73 197
30 % 19 120 122

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.