Sequence Similarity Clusters for the Entities in PDB 1CPC

Entity #1 | Chains: A,K
C-PHYCOCYANIN (ALPHA SUBUNIT) protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39781
95 % 1 1 30053
90 % 1 1 28807
70 % 7 29 362
50 % 7 35 358
40 % 7 44 275
30 % 18 118 124
Entity #2 | Chains: B,L
C-PHYCOCYANIN (BETA SUBUNIT) protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39306
95 % 1 1 29743
90 % 1 1 28510
70 % 7 32 360
50 % 12 52 227
40 % 12 72 191
30 % 19 118 124

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.