Sequence Similarity Clusters for the Entities in PDB 1CP9

Entity #1 | Chains: A
Penicillin G amidase protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63349
95 % 1 1 44166
90 % 1 1 41907
70 % 1 1 36856
50 % 20 22 2898
40 % 20 22 2847
30 % 20 22 2665
Entity #2 | Chains: B
Penicillin G amidase protein, length: 553 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52714
95 % 1 1 38965
90 % 1 1 37187
70 % 1 1 33075
50 % 23 27 1808
40 % 23 29 1700
30 % 23 29 1672

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures