Sequence Similarity Clusters for the Entities in PDB 1CP9

Entity #1 | Chains: A
Penicillin G amidase protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63226
95 % 1 1 46048
90 % 1 1 43782
70 % 1 1 38522
50 % 20 22 2916
40 % 20 22 2844
30 % 20 22 2623
Entity #2 | Chains: B
Penicillin G amidase protein, length: 553 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63224
95 % 1 1 46047
90 % 1 1 43781
70 % 1 1 38521
50 % 23 27 1858
40 % 23 29 1729
30 % 23 29 1696

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures