Sequence Similarity Clusters for the Entities in PDB 1CP9

Entity #1 | Chains: A
Penicillin G amidase protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62615
95 % 1 1 43675
90 % 1 1 41458
70 % 1 1 36476
50 % 20 22 2863
40 % 20 22 2813
30 % 20 22 2637
Entity #2 | Chains: B
Penicillin G amidase protein, length: 553 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52114
95 % 1 1 38527
90 % 1 1 36783
70 % 1 1 32728
50 % 23 27 1782
40 % 23 29 1680
30 % 23 29 1652

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures