Sequence Similarity Clusters for the Entities in PDB 1CP3

Entity #1 | Chains: A,B
APOPAIN protein, length: 277 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37586
95 % 50 58 472 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 0.6
PDBFlex
90 % 50 58 506
70 % 50 58 544
50 % 53 77 414
40 % 66 100 247
30 % 70 112 219
Entity #2 | Chains: C,D
ACETYL-ASP-VAL-ALA-ASP-FLUOROMETHYLKETONE protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures