Sequence Similarity Clusters for the Entities in PDB 1CP3

Entity #1 | Chains: A,B
APOPAIN protein, length: 277 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36266
95 % 50 58 408 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 0.7
PDBFlex
90 % 50 58 442
70 % 50 58 486
50 % 53 76 399
40 % 66 99 242
30 % 70 111 215
Entity #2 | Chains: C,D
ACETYL-ASP-VAL-ALA-ASP-FLUOROMETHYLKETONE protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.