Sequence Similarity Clusters for the Entities in PDB 1COW

Entity #1 | Chains: A,B,C
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 29 245
95 % 24 41 219
90 % 24 41 231
70 % 32 55 155
50 % 36 62 166
40 % 36 62 181
30 % 36 62 194
Entity #2 | Chains: D,E,F
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 40 161
95 % 25 42 220
90 % 25 42 232
70 % 37 63 138
50 % 37 63 167
40 % 37 63 182
30 % 37 63 195
Entity #3 | Chains: G
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 39 751
95 % 23 39 1034
90 % 23 39 1057
70 % 24 41 1049
50 % 24 41 1095
40 % 33 56 622
30 % 33 56 623

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.