Sequence Similarity Clusters for the Entities in PDB 1COW

Entity #1 | Chains: A,B,C
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 29 253
95 % 24 41 250
90 % 24 41 257
70 % 32 59 156
50 % 38 68 159
40 % 38 68 174
30 % 38 68 190
Entity #2 | Chains: D,E,F
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 40 185
95 % 25 42 251
90 % 25 42 258
70 % 39 69 132
50 % 39 69 160
40 % 39 69 175
30 % 39 69 191
Entity #3 | Chains: G
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 39 798
95 % 23 39 1099
90 % 23 39 1121
70 % 24 41 1107
50 % 24 41 1156
40 % 35 62 590
30 % 35 62 594

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.