Sequence Similarity Clusters for the Entities in PDB 1COW

Entity #1 | Chains: A,B,C
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 29 264
95 % 24 41 257
90 % 24 41 265
70 % 32 59 160
50 % 38 71 157
40 % 38 71 173
30 % 38 71 188
Entity #2 | Chains: D,E,F
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 40 189
95 % 25 42 258
90 % 25 42 266
70 % 39 72 130
50 % 39 72 158
40 % 39 72 174
30 % 39 72 189
Entity #3 | Chains: G
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 39 815
95 % 23 39 1120
90 % 23 39 1145
70 % 24 41 1126
50 % 24 41 1181
40 % 35 65 593
30 % 35 65 588

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.