Sequence Similarity Clusters for the Entities in PDB 1COW

Entity #1 | Chains: A,B,C
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 29 300
95 % 24 41 277
90 % 24 41 289
70 % 32 59 166
50 % 38 71 167
40 % 38 71 182
30 % 38 71 199
Entity #2 | Chains: D,E,F
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 40 205
95 % 25 42 278
90 % 25 42 290
70 % 39 72 138
50 % 39 72 168
40 % 39 72 183
30 % 39 72 200
Entity #3 | Chains: G
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 39 878
95 % 23 39 1186
90 % 23 39 1213
70 % 24 41 1183
50 % 24 41 1242
40 % 35 65 627
30 % 35 65 619

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.