Sequence Similarity Clusters for the Entities in PDB 1COV

Entity #1 | Chains: 1
COXSACKIEVIRUS COAT PROTEIN protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24735
95 % 2 4 16111
90 % 2 4 15798
70 % 4 6 10319
50 % 7 14 4109
40 % 78 147 270
30 % 78 147 275
Entity #2 | Chains: 2
COXSACKIEVIRUS COAT PROTEIN protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24949
95 % 2 4 16328
90 % 2 4 16010
70 % 7 15 4019
50 % 73 150 286
40 % 73 150 304
30 % 89 178 163
Entity #3 | Chains: 3
COXSACKIEVIRUS COAT PROTEIN protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25243
95 % 2 4 16666
90 % 2 4 16335
70 % 7 15 4028
50 % 50 114 414
40 % 78 158 253
30 % 94 188 148
Entity #4 | Chains: 4
COXSACKIEVIRUS COAT PROTEIN protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27653
95 % 4 8 9193
90 % 7 12 5642
70 % 37 82 532
50 % 65 116 409
40 % 65 116 445
30 % 65 116 439

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.