Sequence Similarity Clusters for the Entities in PDB 1COV

Entity #1 | Chains: 1
COXSACKIEVIRUS COAT PROTEIN protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25502
95 % 2 4 16637
90 % 2 4 16305
70 % 4 6 10639
50 % 7 14 4228
40 % 78 148 283
30 % 78 148 287
Entity #2 | Chains: 2
COXSACKIEVIRUS COAT PROTEIN protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25729
95 % 2 4 16859
90 % 2 4 16521
70 % 7 15 4136
50 % 73 150 302
40 % 73 150 318
30 % 89 178 170
Entity #3 | Chains: 3
COXSACKIEVIRUS COAT PROTEIN protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 26040
95 % 2 4 17201
90 % 2 4 16851
70 % 7 15 4145
50 % 50 114 433
40 % 78 159 263
30 % 95 189 154
Entity #4 | Chains: 4
COXSACKIEVIRUS COAT PROTEIN protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 28533
95 % 4 8 9504
90 % 7 12 5829
70 % 37 82 578
50 % 65 116 431
40 % 65 116 470
30 % 65 116 460

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.