Sequence Similarity Clusters for the Entities in PDB 1COV

Entity #1 | Chains: 1
COXSACKIEVIRUS COAT PROTEIN protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 26393
95 % 2 4 17217
90 % 2 4 16865
70 % 4 6 11034
50 % 7 14 4382
40 % 78 155 276
30 % 78 155 284
Entity #2 | Chains: 2
COXSACKIEVIRUS COAT PROTEIN protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 26622
95 % 2 4 17446
90 % 2 4 17088
70 % 7 15 4297
50 % 73 157 298
40 % 73 157 313
30 % 90 192 165
Entity #3 | Chains: 3
COXSACKIEVIRUS COAT PROTEIN protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 26944
95 % 2 4 17800
90 % 2 4 17426
70 % 7 15 4307
50 % 78 164 242
40 % 78 166 260
30 % 96 205 146
Entity #4 | Chains: 4
COXSACKIEVIRUS COAT PROTEIN protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 29494
95 % 4 8 9823
90 % 7 12 6049
70 % 37 87 554
50 % 65 122 427
40 % 66 123 454
30 % 66 123 453

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.