Sequence Similarity Clusters for the Entities in PDB 1CN4

Entity #1 | Chains: A,B
PROTEIN (ERYTHROPOIETIN RECEPTOR) protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38319
95 % 8 9 2712 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.5
PDBFlex
90 % 8 9 2757
70 % 8 9 2729
50 % 8 9 2690
40 % 8 9 2658
30 % 8 9 2484
Entity #2 | Chains: C
PROTEIN (ERYTHROPOIETIN) protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41768
95 % 2 3 22817 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.5
PDBFlex
90 % 2 3 22088
70 % 2 3 20232
50 % 2 3 17551
40 % 2 3 15648
30 % 2 3 13377

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.