Sequence Similarity Clusters for the Entities in PDB 1CN4

Entity #1 | Chains: A,B
PROTEIN (ERYTHROPOIETIN RECEPTOR) protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41044
95 % 8 9 2931 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.5
PDBFlex
90 % 8 9 2974
70 % 8 9 2937
50 % 8 9 2891
40 % 8 9 2840
30 % 8 9 2662
Entity #2 | Chains: C
PROTEIN (ERYTHROPOIETIN) protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 44697
95 % 2 3 24459 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.5
PDBFlex
90 % 2 3 23630
70 % 2 3 21519
50 % 2 3 18596
40 % 2 3 16562
30 % 2 3 14161

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures