Sequence Similarity Clusters for the Entities in PDB 1CN4

Entity #1 | Chains: A,B
PROTEIN (ERYTHROPOIETIN RECEPTOR) protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30697
95 % 8 9 3021 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.5
PDBFlex
90 % 8 9 3073
70 % 8 9 3025
50 % 8 9 2981
40 % 8 9 2905
30 % 8 9 2685
Entity #2 | Chains: C
PROTEIN (ERYTHROPOIETIN) protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28141
95 % 2 3 24661 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.5
PDBFlex
90 % 2 3 23830
70 % 2 3 21667
50 % 2 3 18626
40 % 2 3 16458
30 % 2 3 13794

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures