Sequence Similarity Clusters for the Entities in PDB 1CN4

Entity #1 | Chains: A,B
PROTEIN (ERYTHROPOIETIN RECEPTOR) protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40498
95 % 8 9 2886 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.5
PDBFlex
90 % 8 9 2928
70 % 8 9 2895
50 % 8 9 2850
40 % 8 9 2801
30 % 8 9 2629
Entity #2 | Chains: C
PROTEIN (ERYTHROPOIETIN) protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 44102
95 % 2 3 24130 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.5
PDBFlex
90 % 2 3 23316
70 % 2 3 21249
50 % 2 3 18384
40 % 2 3 16375
30 % 2 3 13997

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures