Sequence Similarity Clusters for the Entities in PDB 1CMY

Entity #1 | Chains: A,C
HEMOGLOBIN YPSILANTI (CARBONMONOXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 201 213 22
95 % 231 244 30 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 232 245 31
70 % 307 326 15
50 % 703 742 4
40 % 708 747 7
30 % 1139 1190 8
Entity #2 | Chains: B,D
HEMOGLOBIN YPSILANTI (CARBONMONOXY) (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43919
95 % 232 244 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 237 249 19
70 % 321 340 13
50 % 704 742 4
40 % 709 747 7
30 % 1140 1190 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.