Sequence Similarity Clusters for the Entities in PDB 1CMX

Entity #1 | Chains: A,C
PROTEIN (UBIQUITIN YUH1-UBAL) protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 36740
95 % 1 1 36951
90 % 1 1 34540
70 % 1 1 31366
50 % 1 1 26694
40 % 1 1 20290
30 % 7 13 2701
Entity #2 | Chains: B,D
PROTEIN (UBIQUITIN YUH1-UBAL) protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 210 397 4
95 % 223 421 5
90 % 232 434 6
70 % 249 467 8
50 % 255 488 10
40 % 268 515 15
30 % 323 673 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures