Sequence Similarity Clusters for the Entities in PDB 1CMX

Entity #1 | Chains: A,C
PROTEIN (UBIQUITIN YUH1-UBAL) protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39493
95 % 1 1 30386
90 % 1 1 29306
70 % 1 1 26375
50 % 1 1 22529
40 % 1 1 19841
30 % 7 13 2705
Entity #2 | Chains: B,D
PROTEIN (UBIQUITIN YUH1-UBAL) protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 165 321 4
95 % 206 396 5
90 % 220 423 6
70 % 233 446 8
50 % 239 467 11
40 % 252 491 15
30 % 492 1044 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures