Sequence Similarity Clusters for the Entities in PDB 1CMV

Entity #1 | Chains: A,B
HUMAN CYTOMEGALOVIRUS PROTEASE protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39656
95 % 9 15 1564 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.9
PDBFlex
90 % 9 15 1596
70 % 9 15 1601
50 % 9 15 1657
40 % 9 15 1671
30 % 12 18 1381

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures