Sequence Similarity Clusters for the Entities in PDB 1CMV

Entity #1 | Chains: A,B
HUMAN CYTOMEGALOVIRUS PROTEASE protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36902
95 % 9 15 1430 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.9
PDBFlex
90 % 9 15 1455
70 % 9 15 1477
50 % 9 15 1532
40 % 9 15 1556
30 % 12 18 1305

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.