Sequence Similarity Clusters for the Entities in PDB 1CMK

Entity #1 | Chains: E
cAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 26459
95 % 186 198 140 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 0.9
PDBFlex
90 % 186 199 145
70 % 186 199 168
50 % 186 199 198
40 % 186 199 214
30 % 3662 3941 2
Entity #2 | Chains: I
cAMP-dependent protein kinase inhibitor, alpha form protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 124 126 199
95 % 124 126 262 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 0.7
PDBFlex
90 % 150 152 233
70 % 150 152 267
50 % 150 152 286
40 % 150 152 302
30 % 150 152 308

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures