Sequence Similarity Clusters for the Entities in PDB 1CMK

Entity #1 | Chains: E
cAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 26045
95 % 180 192 138 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 0.9
PDBFlex
90 % 180 193 148
70 % 180 193 167
50 % 180 193 197
40 % 180 193 216
30 % 3602 3879 2
Entity #2 | Chains: I
cAMP-dependent protein kinase inhibitor, alpha form protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 119 121 197
95 % 119 121 268 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 0.7
PDBFlex
90 % 145 147 233
70 % 145 147 265
50 % 145 147 289
40 % 145 147 307
30 % 145 147 316

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.