Sequence Similarity Clusters for the Entities in PDB 1CMK

Entity #1 | Chains: E
cAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 16176
95 % 241 253 123 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 0.9
PDBFlex
90 % 241 254 126
70 % 241 254 146
50 % 241 254 173
40 % 319 340 132
30 % 4018 4330 2
Entity #2 | Chains: I
cAMP-dependent protein kinase inhibitor, alpha form protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 159 161 179
95 % 159 161 222 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 0.7
PDBFlex
90 % 159 161 232
70 % 159 161 253
50 % 159 161 279
40 % 159 161 310
30 % 159 161 320

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures