Sequence Similarity Clusters for the Entities in PDB 1CM4

Entity #1 | Chains: A
CALMODULIN protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 30 139 103
95 % 33 176 90 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 42 189 87
70 % 43 191 103
50 % 49 224 113
40 % 52 347 41
30 % 54 374 53
Entity #2 | Chains: B
CALMODULIN-DEPENDENT PROTEIN KINASE II-ALPHA protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 30898
95 % 1 3 25586
90 % 1 3 24718
70 % 1 3 22451
50 % 1 3 19435
40 % 1 3 17300
30 % 1 3 14847

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures