Sequence Similarity Clusters for the Entities in PDB 1CM4

Entity #1 | Chains: A
CALMODULIN protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 34 186 60
95 % 35 190 79 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 44 203 76
70 % 45 205 92
50 % 51 238 105
40 % 54 361 40
30 % 67 432 41
Entity #2 | Chains: B
CALMODULIN-DEPENDENT PROTEIN KINASE II-ALPHA protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 28999
95 % 1 3 25353
90 % 1 3 24480
70 % 1 3 22193
50 % 1 3 19054
40 % 1 3 16083
30 % 1 3 13344

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures