Sequence Similarity Clusters for the Entities in PDB 1CM4

Entity #1 | Chains: A
CALMODULIN protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 29 133 104
95 % 32 170 90 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 41 183 87
70 % 42 185 103
50 % 48 218 114
40 % 51 341 41
30 % 53 368 53
Entity #2 | Chains: B
CALMODULIN-DEPENDENT PROTEIN KINASE II-ALPHA protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 30384
95 % 1 3 25202
90 % 1 3 24360
70 % 1 3 22138
50 % 1 3 19165
40 % 1 3 17074
30 % 1 3 14660

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.