Sequence Similarity Clusters for the Entities in PDB 1CM4

Entity #1 | Chains: A
CALMODULIN protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 27 130 100
95 % 30 165 93 Flexibility: Medium
Max RMSD: 18.8, Avg RMSD: 9.7
PDBFlex
90 % 39 178 82
70 % 40 180 98
50 % 46 213 112
40 % 49 336 34
30 % 51 363 47
Entity #2 | Chains: B
CALMODULIN-DEPENDENT PROTEIN KINASE II-ALPHA protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 29561
95 % 1 3 24508
90 % 1 3 23710
70 % 1 3 21662
50 % 1 3 18793
40 % 1 3 16747
30 % 1 3 14382

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.