Sequence Similarity Clusters for the Entities in PDB 1CM1

Entity #1 | Chains: A
CALMODULIN protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 60 186 60
95 % 61 190 79 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 73 203 77
70 % 74 205 93
50 % 84 238 105
40 % 94 361 40
30 % 116 432 42
Entity #2 | Chains: B
CALMODULIN-DEPENDENT PROTEIN KINASE II-ALPHA protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 29052
95 % 3 3 25393
90 % 3 3 24521
70 % 3 3 22227
50 % 3 3 19085
40 % 3 3 16110
30 % 3 3 13367

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures