Sequence Similarity Clusters for the Entities in PDB 1CM1

Entity #1 | Chains: A
CALMODULIN protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 50 131 101
95 % 57 168 91 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.7
PDBFlex
90 % 69 181 81
70 % 70 183 100
50 % 80 216 115
40 % 90 339 38
30 % 95 366 48
Entity #2 | Chains: B
CALMODULIN-DEPENDENT PROTEIN KINASE II-ALPHA protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 30008
95 % 3 3 24900
90 % 3 3 24075
70 % 3 3 21903
50 % 3 3 18979
40 % 3 3 16905
30 % 3 3 14514

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.