Sequence Similarity Clusters for the Entities in PDB 1CM1

Entity #1 | Chains: A
CALMODULIN protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 49 130 101
95 % 56 165 93 Flexibility: Medium
Max RMSD: 18.8, Avg RMSD: 9.7
PDBFlex
90 % 68 178 82
70 % 69 180 98
50 % 79 213 112
40 % 89 336 34
30 % 94 363 47
Entity #2 | Chains: B
CALMODULIN-DEPENDENT PROTEIN KINASE II-ALPHA protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 29513
95 % 3 3 24463
90 % 3 3 23667
70 % 3 3 21625
50 % 3 3 18764
40 % 3 3 16719
30 % 3 3 14357

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.