Sequence Similarity Clusters for the Entities in PDB 1CLZ

Entity #1 | Chains: L
IGG FAB (IGG3, KAPPA) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60128
95 % 121 146 147 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 130 156 148
70 % 1441 2329 1
50 % 2928 4717 1
40 % 2928 4717 1
30 % 3405 5571 1
Entity #2 | Chains: H
IGG FAB (IGG3, KAPPA) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60239
95 % 1 1 42308
90 % 1 1 40307
70 % 1415 2282 2
50 % 2929 4717 1
40 % 2929 4717 1
30 % 3406 5571 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.