Sequence Similarity Clusters for the Entities in PDB 1CLZ

Entity #1 | Chains: L
IGG FAB (IGG3, KAPPA) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62139
95 % 121 148 151 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 130 158 148
70 % 1545 2479 1
50 % 3138 5021 1
40 % 3138 5021 1
30 % 3679 5951 1
Entity #2 | Chains: H
IGG FAB (IGG3, KAPPA) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62257
95 % 1 1 43667
90 % 1 1 41541
70 % 1516 2429 2
50 % 3139 5021 1
40 % 3139 5021 1
30 % 3680 5951 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures