Sequence Similarity Clusters for the Entities in PDB 1CLZ

Entity #1 | Chains: L
IGG FAB (IGG3, KAPPA) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61325
95 % 121 148 148 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 130 158 146
70 % 1511 2426 1
50 % 3069 4913 1
40 % 3069 4913 1
30 % 3556 5780 1
Entity #2 | Chains: H
IGG FAB (IGG3, KAPPA) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61442
95 % 1 1 43110
90 % 1 1 41029
70 % 1482 2376 2
50 % 3070 4913 1
40 % 3070 4913 1
30 % 3557 5780 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures