Sequence Similarity Clusters for the Entities in PDB 1CLV

Entity #1 | Chains: A
PROTEIN (ALPHA-AMYLASE) protein, length: 471 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 26407
95 % 2 4 16420 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 2 4 16110
70 % 2 4 15065
50 % 35 83 593
40 % 39 92 570
30 % 39 92 565
Entity #2 | Chains: I
PROTEIN (ALPHA-AMYLASE INHIBITOR) protein, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 31246
95 % 1 3 25873
90 % 1 3 24994
70 % 1 3 22687
50 % 1 3 19615
40 % 1 3 17451
30 % 1 3 14976

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures