Sequence Similarity Clusters for the Entities in PDB 1CL7

Entity #1 | Chains: L
PROTEIN (IGG1 ANTIBODY 1696 (light chain)) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61255
95 % 128 146 149 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 137 156 149
70 % 1558 2392 1
50 % 3160 4843 1
40 % 3160 4843 1
30 % 3687 5705 1
Entity #2 | Chains: H
PROTEIN (IGG1 ANTIBODY 1696 (variable heavy chain)) protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66975
95 % 1 1 46194
90 % 1 1 43793
70 % 1 1 38430
50 % 1 1 32712
40 % 663 936 5
30 % 739 1065 7
Entity #3 | Chains: I
PROTEIN (IGG1 ANTIBODY 1696 (constant heavy chain)) protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72094
95 % 1 1 49870
90 % 1 1 47284
70 % 1 1 41437
50 % 1 1 35340
40 % 1 1 31152
30 % 1 1 26281

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures