Sequence Similarity Clusters for the Entities in PDB 1CL7

Entity #1 | Chains: L
PROTEIN (IGG1 ANTIBODY 1696 (light chain)) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62399
95 % 128 148 151 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 137 158 148
70 % 1613 2474 1
50 % 3272 5011 1
40 % 3272 5011 1
30 % 3858 5941 1
Entity #2 | Chains: H
PROTEIN (IGG1 ANTIBODY 1696 (variable heavy chain)) protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68213
95 % 1 1 46991
90 % 1 1 44513
70 % 1 1 39043
50 % 1 1 33211
40 % 671 956 5
30 % 747 1085 7
Entity #3 | Chains: I
PROTEIN (IGG1 ANTIBODY 1696 (constant heavy chain)) protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73384
95 % 1 1 50710
90 % 1 1 48046
70 % 1 1 42081
50 % 1 1 35865
40 % 1 1 31614
30 % 1 1 26662

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures