Sequence Similarity Clusters for the Entities in PDB 1CL7

Entity #1 | Chains: L
PROTEIN (IGG1 ANTIBODY 1696 (light chain)) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59202
95 % 128 145 146 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 137 155 148
70 % 1470 2264 1
50 % 2985 4587 1
40 % 2985 4587 1
30 % 3477 5394 1
Entity #2 | Chains: H
PROTEIN (IGG1 ANTIBODY 1696 (variable heavy chain)) protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64684
95 % 1 1 44608
90 % 1 1 42353
70 % 1 1 37302
50 % 1 1 31824
40 % 629 887 5
30 % 703 1013 7
Entity #3 | Chains: I
PROTEIN (IGG1 ANTIBODY 1696 (constant heavy chain)) protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69638
95 % 1 1 48169
90 % 1 1 45737
70 % 1 1 40250
50 % 1 1 34414
40 % 1 1 30359
30 % 1 1 25610

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.