Sequence Similarity Clusters for the Entities in PDB 1CL7

Entity #1 | Chains: L
PROTEIN (IGG1 ANTIBODY 1696 (light chain)) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59983
95 % 128 145 147 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 137 155 150
70 % 1482 2287 1
50 % 3009 4633 1
40 % 3009 4633 1
30 % 3514 5461 1
Entity #2 | Chains: H
PROTEIN (IGG1 ANTIBODY 1696 (variable heavy chain)) protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65598
95 % 1 1 45275
90 % 1 1 42971
70 % 1 1 37758
50 % 1 1 32145
40 % 650 916 5
30 % 724 1042 7
Entity #3 | Chains: I
PROTEIN (IGG1 ANTIBODY 1696 (constant heavy chain)) protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70661
95 % 1 1 48935
90 % 1 1 46448
70 % 1 1 40763
50 % 1 1 34771
40 % 1 1 30659
30 % 1 1 25860

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.