Sequence Similarity Clusters for the Entities in PDB 1CKU

Entity #1 | Chains: A,B
PROTEIN (HIPIP) protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 13763
95 % 2 8 6359 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 2 8 6348
70 % 9 18 2678
50 % 9 18 2652
40 % 9 19 2469
30 % 9 20 2046

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures