Sequence Similarity Clusters for the Entities in PDB 1CKU

Entity #1 | Chains: A,B
PROTEIN (HIPIP) protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 16131
95 % 2 8 6165 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 2 8 6158
70 % 9 18 2667
50 % 9 18 2629
40 % 9 19 2406
30 % 9 23 1802

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures