Sequence Similarity Clusters for the Entities in PDB 1CKS

Entity #1 | Chains: A,B,C
CYCLIN-DEPENDENT KINASE SUBUNIT, TYPE 2 protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 10010
95 % 1 5 10054 Flexibility: Medium
Max RMSD: 15.2, Avg RMSD: 7.0
PDBFlex
90 % 1 5 9931
70 % 1 9 3868
50 % 1 9 3759
40 % 1 9 3616
30 % 1 9 3389

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures