Sequence Similarity Clusters for the Entities in PDB 1CKN

Entity #1 | Chains: A
MRNA CAPPING ENZYME protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 14902
95 % 2 4 14087 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 2.6
PDBFlex
90 % 2 4 13861
70 % 2 4 13047
50 % 2 4 11600
40 % 2 4 10522
30 % 2 4 9167
Entity #2 | Chains: B
MRNA CAPPING ENZYME protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 14902
95 % 3 4 14087 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 2.6
PDBFlex
90 % 3 4 13861
70 % 3 4 13047
50 % 3 4 11600
40 % 3 4 10522
30 % 3 4 9167

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures