Sequence Similarity Clusters for the Entities in PDB 1CKN

Entity #1 | Chains: A
MRNA CAPPING ENZYME protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 16648
95 % 2 4 15455 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 2.6
PDBFlex
90 % 2 4 15131
70 % 2 4 14171
50 % 2 4 12525
40 % 2 4 11245
30 % 2 4 9562
Entity #2 | Chains: B
MRNA CAPPING ENZYME protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 16648
95 % 3 4 15455 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 2.6
PDBFlex
90 % 3 4 15131
70 % 3 4 14171
50 % 3 4 12525
40 % 3 4 11245
30 % 3 4 9562

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures