Sequence Similarity Clusters for the Entities in PDB 1CKM

Entity #1 | Chains: A,B
MRNA CAPPING ENZYME protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 15059
95 % 1 4 14218 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 2.6
PDBFlex
90 % 1 4 13996
70 % 1 4 13173
50 % 1 4 11716
40 % 1 4 10622
30 % 1 4 9258

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures