Sequence Similarity Clusters for the Entities in PDB 1CKL

Entity #1 | Chains: A,B,C,D,E,F
PROTEIN (CD46) protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 2215
95 % 4 4 2860 Flexibility: Low
Max RMSD: 5.4, Avg RMSD: 2.6
PDBFlex
90 % 4 4 2902
70 % 4 4 2860
50 % 4 4 2819
40 % 4 4 2781
30 % 27 48 664

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.