Sequence Similarity Clusters for the Entities in PDB 1CKK

Entity #1 | Chains: A
PROTEIN (CALMODULIN) protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 146 149 96
95 % 181 187 82
90 % 194 200 81
70 % 196 202 96
50 % 226 235 105
40 % 349 358 41
30 % 376 385 50
Entity #2 | Chains: B
PROTEIN (RAT CA2+/CALMODULIN DEPENDENT PROTEIN KINASE) protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 77130
95 % 1 1 53755
90 % 1 1 50928
70 % 1 1 44530
50 % 1 1 37976
40 % 1 1 33497
30 % 1 1 28430

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures