Sequence Similarity Clusters for the Entities in PDB 1CKE

Entity #1 | Chains: A
PROTEIN (CYTIDINE MONOPHOSPHATE KINASE) protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51244
95 % 1 8 5826 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.6
PDBFlex
90 % 1 8 5848
70 % 1 8 5718
50 % 1 8 5400
40 % 5 18 2287
30 % 5 18 2108

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures