Sequence Similarity Clusters for the Entities in PDB 1CKB

Entity #1 | Chains: A
C-CRK N-TERMINAL SH3 DOMAIN protein, length: 57 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 9 6848
95 % 5 9 7423 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 5 9 7369
70 % 5 9 7181
50 % 5 9 6612
40 % 5 9 6161
30 % 253 1038 9
Entity #2 | Chains: B
SOS PEPTIDE (PRO-PRO-PRO-VAL-PRO-PRO-ARG-ARG-ARG-ARG) protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.