Sequence Similarity Clusters for the Entities in PDB 1CK6

Entity #1 | Chains: A
PROTEIN (PEROXIDASE) protein, length: 344 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 14 3920
95 % 10 19 2480 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 10 19 2542
70 % 10 19 2530
50 % 44 70 637
40 % 44 70 667
30 % 44 70 663

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2E3B 1 A Peroxidase 5451 1.11.1.7 | Details
2 2E39 1 A Peroxidase 5451 1.11.1.7 | Details
3 2E3A 1 A Peroxidase 5451 1.11.1.7 | Details
4 1ARU 1 A PEROXIDASE PH 7.5 5451 1.11.1.7 | Details
5 1ARV 1 A PEROXIDASE PH 5.0 5451 1.11.1.7 | Details
6 1ARW 1 A PEROXIDASE PH 4.0 5451 1.11.1.7 | Details
7 1HSR 1 A PEROXIDASE 5451 1.11.1.7 | Details
8 1LYC 1 A, B Peroxidase 5346 1.11.1.7 | Details
9 1GZB 1 A PEROXIDASE PH 4.5 5451 1.11.1.7 | Details
10 1CK6 1 A PROTEIN (PEROXIDASE) 5451 1.11.1.7 | Details
11 1ARY 1 A PEROXIDASE PH 5.0 5451 1.11.1.7 | Details
12 1ARX 1 A PEROXIDASE PH 6.5 5451 1.11.1.7 | Details
13 1ARP 1 A PEROXIDASE 5079 1.11.1.7 | Details
14 1C8I 1 A PROTEIN (PEROXIDASE) 5451 1.11.1.7 | Details
15 1GZA 1 A PEROXIDASE PH 5.5 5451 1.11.1.7 | Details
16 1LY9 1 A, B Peroxidase 5346 1.11.1.7 | Details
17 1LYK 1 A, B Peroxidase 5346 1.11.1.7 | Details
18 1H3J 1 A, B PEROXIDASE N-LINKED GLYCOSYLATION SITE AT ASN142 O-LINKED GLYCOSYLATION SITE AT SER338 CATALYTIC DOMAIN, RESIDUES 22-363 5346 1.11.1.7 | Details
19 1LY8 1 A, B Peroxidase 5346 1.11.1.7 | Details