Sequence Similarity Clusters for the Entities in PDB 1CK4

Entity #1 | Chains: A,B
INTEGRIN ALPHA-1 protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36697
95 % 7 9 5064 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 7 9 5095
70 % 7 9 4918
50 % 11 15 1917
40 % 11 15 1910
30 % 41 63 425

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures