Sequence Similarity Clusters for the Entities in PDB 1CK1

Entity #1 | Chains: A
PROTEIN (ENTEROTOXIN TYPE C-3) protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28767
95 % 18 29 1568 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.0
PDBFlex
90 % 18 29 1588
70 % 18 29 1595
50 % 27 57 540
40 % 29 60 537
30 % 46 90 406

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1CK1 1 A PROTEIN (ENTEROTOXIN TYPE C-3) 1280
2 1JCK 2 B, D STAPHYLOCOCCAL ENTEROTOXIN C3 1280