Sequence Similarity Clusters for the Entities in PDB 1CJU

Entity #1 | Chains: A
ADENYLATE CYCLASE, TYPE V protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 16 3386
95 % 5 16 4160 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 5 16 4193
70 % 5 16 4127
50 % 5 16 3975
40 % 5 16 3798
30 % 5 16 3538
Entity #2 | Chains: B
ADENYLATE CYCLASE, TYPE II protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 17 2876
95 % 6 17 3573 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.8
PDBFlex
90 % 6 17 3625
70 % 6 17 3573
50 % 6 17 3475
40 % 6 17 3358
30 % 15 26 1837
Entity #3 | Chains: C
GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) protein, length: 402 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 14709
95 % 6 20 2929 Flexibility: Low
Max RMSD: 18.4, Avg RMSD: 2.4
PDBFlex
90 % 6 20 2975
70 % 6 20 2939
50 % 6 20 2899
40 % 59 97 380
30 % 61 99 363

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4N0D 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 10116 3.6.5.1 | Details
2 1SVS 1 A Guanine nucleotide-binding protein G(i), alpha-1 subunit 10116 3.6.5.1 | Details
3 1CIP 1 A PROTEIN (GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-1 SUBUNIT) 10116
4 1TAD 1 A, B, C TRANSDUCIN-ALPHA 9913
5 1TAG 1 A TRANSDUCIN-ALPHA 9913
6 2ODE 1 A, C Guanine nucleotide-binding protein G(k) subunit alpha 9606
7 5KDO 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 10116
8 4PAO 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 10116
9 4PAQ 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 10116
10 1GIA 1 A G PROTEIN GI ALPHA 1 10116
11 3UMR 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 9606
12 1SVK 1 A Guanine nucleotide-binding protein G(i), alpha-1 subunit 10116 3.6.5.1 | Details
13 1AS0 1 A GIA1 GTP-GAMMA-S BOUND G42V GIA1 10116
14 1GOT 1 A GT-ALPHA/GI-ALPHA CHIMERA THIS IS A CHIMERIC PROTEIN WHERE RESIDUES 216-294 OF BOVINE GT ALPHA HAVE BEEN REPLACED WITH RESIDUES 220-298 OF RAT GI ALPHA 1 9913
15 1ZCB 1 A G alpha i/13 N-terminal residues 1-28 of G alpha i followed by residues 47-377 of G alpha 13 10090
16 4N0E 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 10116 3.6.5.1 | Details
17 1BH2 1 A GUANINE NUCLEOTIDE-BINDING PROTEIN 10116
18 4PAM 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 10116
19 1TND 1 A, B, C TRANSDUCIN 9913
20 1FQJ 1 A, D Guanine nucleotide-binding protein G(t) subunit alpha-1,Guanine nucleotide-binding protein G(i) subunit alpha-1,Guanine nucleotide-binding protein G(t) subunit alpha-1 THE CHIMERA COMPRISES RESIDUES 26 TO 215 OF BOVINE GT, RESIDUES 220 TO 298 OF RAT GI1, AND RESIDUES 295 TO 350 OF BOVINE GT UNP P04695 residues 26-215 and 295-350 linked via UNP P10824 residues 220-298 10116
21 3CX8 1 A Guanine nucleotide-binding protein alpha-13 subunit N-terminally truncated 10090
22 3FFA 1 A Guanine nucleotide-binding protein G(i), alpha-1 subunit 10116
23 3UMS 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 9606
24 1GDD 1 A GI ALPHA 1 INACTIVE FORM 10116
25 1GFI 1 A GUANINE NUCLEOTIDE-BINDING PROTEIN G 10116
26 4PAN 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 10116
27 2OM2 1 A, C Guanine nucleotide-binding protein G(i), alpha-1 subunit G{alpha}i1 9606
28 1BOF 1 A GI ALPHA 1 INACTIVE FORM 10116
29 1AZS 3 C GS-ALPHA 9913
30 1AZT 1 A, B GS-ALPHA 9913
31 1GIL 1 A G PROTEIN GI ALPHA 1 10116
32 3AB3 1 A, C Guanine nucleotide-binding protein G(k) subunit alpha, Guanine nucleotide-binding protein subunit alpha-13 ONE FUSED PROTEIN IS MADE OF RESIDUES 1-28 OF G ALPHA I, LINKER, AND RESIDUES 47-377 OF G ALPHA 13 UNP RESIDUES 1-28 (G ALPHA I), UNP RESIDUES 47-377 (G ALPHA 13) 10090
33 1GG2 1 A G PROTEIN GI ALPHA 1 ALPHA 1 10116
34 1GP2 1 A G PROTEIN GI ALPHA 1 ALPHA 1 10116
35 3FFB 1 A Guanine nucleotide-binding protein G(i), alpha-1 subunit 10116
36 1AS3 1 A GIA1 GDP BOUND G42V GIA1 10116
37 5DO9 1 A, C, E Guanine nucleotide-binding protein G(q) subunit alpha Guanine nucleotide-binding protein G(q) subunit alpha 10090
38 1FQK 1 A, C Guanine nucleotide-binding protein G(t) subunit alpha-1,Guanine nucleotide-binding protein G(i) subunit alpha-1,Guanine nucleotide-binding protein G(t) subunit alpha-1 THE CHIMERA COMPRISES RESIDUES 26 TO 215 OF BOVINE GT, RESIDUES 220 TO 298 OF RAT GI1, AND RESIDUES 295 TO 350 OF BOVINE GT UNP P04695 residues 26-215 and 295-350 linked via UNP P10824 residues 220-298 10116
39 1GIT 1 A G PROTEIN GI ALPHA 1 STRUCTURE MIMICS THE TERNARY COMPLEX ALPHA 1 10116
40 1CUL 3 C GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) GS(ALPHA) 9913
41 3ONW 1 A, B Guanine nucleotide-binding protein G(i) subunit alpha-1 9606 3.6.5.1 | Details
42 3CX7 1 A Guanine Nucleotide-Binding Protein Galpha 13 N-terminally truncated 10090
43 1CS4 3 C GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) GS(ALPHA) 9913
44 2ZJY 1 A Guanine nucleotide-binding protein G(i), alpha-1 subunit 10116 3.6.5.1 | Details
45 4EKD 1 A Guanine nucleotide-binding protein G(q) subunit alpha UNP residues 18-359 10090 3.6.5.1 | Details
46 1AS2 1 A GIA1 GDP+PI BOUND G42V GIA1 10116
47 2GTP 1 A, B Guanine nucleotide-binding protein G(i), alpha-1 subunit 9606
48 2ZJZ 1 A, B Guanine nucleotide-binding protein G(i), alpha-1 subunit 10116 3.6.5.1 | Details
49 3OHM 1 A Guanine nucleotide-binding protein G(q) subunit alpha unp residues 35-359 10090
50 5KDL 1 A, B Guanine nucleotide-binding protein G(i) subunit alpha-1 10116
51 2IHB 1 A Guanine nucleotide-binding protein G(k) subunit alpha 9606
52 3QI2 1 A, B Guanine nucleotide-binding protein G(i) subunit alpha-1 alpha-i1 subunit, residues 31-354 9606 3.6.5.1 | Details
53 1CJT 3 C GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) TRYPSINIZED FRAGMENT 9913
54 2V4Z 1 A GUANINE NUCLEOTIDE-BINDING PROTEIN G(K) SUBUNIT ALPHA SUBUNIT ALPHA, RESIDUES 4-350 9606
55 1Y3A 1 A, B, C, D Guanine nucleotide-binding protein G(i), alpha-1 subunit sequence database residues 25-353 9606
56 1AGR 1 A, D GUANINE NUCLEOTIDE-BINDING PROTEIN G(I) ALPHA-1 10116
57 4QJ3 1 A Guanine nucleotide-binding protein G(q) subunit alpha UNP residues 7-359 10090
58 4G5Q 1 A, B, C, D Guanine nucleotide-binding protein G(i) subunit alpha-1 UNP RESIDUES 25-354 9606
59 1CJU 3 C GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) TRYPSINIZED FRAGMENT 9913
60 4G5O 1 A, B, C, D Guanine nucleotide-binding protein G(k) subunit alpha UNP RESIDUES 25-354 9606
61 3CX6 1 A Guanine nucleotide-binding protein alpha-13 subunit N-terminally truncated 10090
62 2IK8 1 A, C Guanine nucleotide-binding protein G(i), alpha-1 subunit 9606
63 1KJY 1 A, C GUANINE NUCLEOTIDE-BINDING PROTEIN G(I), ALPHA-1 SUBUNIT 9606
64 1CJV 3 C GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) TRYPSINIZED FRAGMENT 9913
65 3C14 3 C Guanine nucleotide-binding protein G(s) subunit alpha isoforms short TRYPSINIZED FRAGMENT 9913
66 3V00 1 A, B, C Guanine nucleotide-binding protein G(t) subunit alpha-1/ Guanine nucleotide-binding protein G(i) subunit alpha-1 chimeric protein UNP P04695 1-215 & 295-350, UNP P10824 220-298 10116
67 1SHZ 1 A, D Guanine Nucleotide-Binding Protein Galpha(13):Galpha(i1) Chimera residues 21-47, 185-210, 213-230, 240-353 of Galpha(i1) and residues 64-207, 234-235, 254-262 of Galpha(13) 10116
68 3C15 3 C Guanine nucleotide-binding protein G(s) subunit alpha isoforms short TRYPSINIZED FRAGMENT 9913
69 1CJK 3 C GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) TRYPSINIZED FRAGMENT 9913
70 1ZCA 1 A, B G alpha i/12 N-terminal residues 1-28 of G alpha i followed by residues 49-379 of G alpha 12 10090
71 1TL7 3 C Guanine nucleotide-binding protein G(s), alpha subunit 9913
72 2GVD 3 C Guanine nucleotide-binding protein G(s), alpha subunit 9913
73 1U0H 3 C Guanine nucleotide-binding protein G(s), alpha subunit 9913
74 3C16 3 C Guanine nucleotide-binding protein G(s) subunit alpha isoforms short TRYPSINIZED FRAGMENT 9913
75 3D7M 1 A Guanine nucleotide-binding protein G(i), alpha-1 subunit 10116
76 3C7K 1 A, C Guanine nucleotide-binding protein G(o) subunit alpha Residues 22-354 10090
77 4QJ4 1 A Guanine nucleotide-binding protein G(q) subunit alpha UNP residues 7-359 10090
78 3MAA 3 C Guanine nucleotide-binding protein G(s) subunit alpha isoforms short 9913
79 2BCJ 4 Q Guanine nucleotide-binding protein G(i) subunit alpha-1, Guanine nucleotide-binding protein G(q) subunit alpha chimera 10116
80 3SN6 1 A Guanine nucleotide-binding protein G(s) subunit alpha isoforms short 9913
81 3QE0 1 A, B, C Guanine nucleotide-binding protein G(i) subunit alpha-1 alpha-i1 subunit, residues 33-354 9606 3.6.5.1 | Details
82 3AH8 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1/Guanine nucleotide-binding protein G(q) subunit alpha chimeric protein UNP entry P10824 residues 2-28, UNP entry P21279 residues 37-359 10116
83 3G82 3 C Guanine nucleotide-binding protein G(s) subunit alpha isoforms short TRYPSINIZED FRAGMENT OF G(S)ALPHA SUBUNIT 9913
84 4QJ5 1 A Guanine nucleotide-binding protein G(q) subunit alpha UNP residues 7-359 10090
85 4G5R 1 A, B, C, D Guanine nucleotide-binding protein G(k) subunit alpha UNP RESIDUES 25-354 9606
86 2XNS 1 A, B GUANINE NUCLEOTIDE-BINDING PROTEIN G(I) SUBUNIT ALPHA-1 RESIDUES 30-354 9606 3.6.5.1 | Details
87 4G5S 1 A, B, C, D Guanine nucleotide-binding protein G(k) subunit alpha UNP RESIDUES 25-354 9606
88 2G83 1 A, B Guanine nucleotide-binding protein G(i), alpha-1 subunit 9606
89 5TDH 1 A, H Guanine nucleotide-binding protein G(i) subunit alpha-1 9606
90 2RGN 1 A, D Guanine nucleotide-binding protein G(i) subunit alpha-1,Guanine nucleotide-binding protein G(q) subunit alpha Chimeric protein of rat Guanine nucleotide-binding protein G(i) subunit alpha-1 N-terminal helix residues 1-28 and mouse Guanine nucleotide-binding protein G(q) subunit alpha residues 31-353,Chimeric protein of rat Guanine nucleotide-binding protein G(i) 10116
91 4GNK 1 A, C Guanine nucleotide-binding protein G(q) subunit alpha UNP residues 7-359 10090
92 2GVZ 3 C Guanine nucleotide-binding protein G(s), alpha subunit 9913
93 4EKC 1 A, C Guanine nucleotide-binding protein G(q) subunit alpha UNP residues 18-359 10090 3.6.5.1 | Details
94 5VAI 3 A Guanine nucleotide-binding protein G(s) subunit alpha isoforms short UNP residuews 1-380 9606
95 5UZ7 1 A Guanine nucleotide-binding protein G(s) subunit alpha isoforms short 9606
96 5JS7 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 9606
97 5JS8 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 9606