Sequence Similarity Clusters for the Entities in PDB 1CJU

Entity #1 | Chains: A
ADENYLATE CYCLASE, TYPE V protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 16 4290
95 % 5 16 4651 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 5 16 4679
70 % 5 16 4554
50 % 5 16 4365
40 % 5 16 4130
30 % 5 16 3738
Entity #2 | Chains: B
ADENYLATE CYCLASE, TYPE II protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 17 3650
95 % 6 17 3958 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.8
PDBFlex
90 % 6 17 4017
70 % 6 17 3923
50 % 6 17 3805
40 % 6 17 3624
30 % 16 27 1336
Entity #3 | Chains: C
GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) protein, length: 402 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 16 3814
95 % 7 23 2730 Flexibility: Low
Max RMSD: 18.4, Avg RMSD: 2.4
PDBFlex
90 % 7 23 2945
70 % 7 23 2913
50 % 61 109 381
40 % 63 111 398
30 % 63 111 399

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4N0D 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 10116 3.6.5.1 | Details
2 1SVS 1 A Guanine nucleotide-binding protein G(i), alpha-1 subunit 10116 3.6.5.1 | Details
3 1CIP 1 A PROTEIN (GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-1 SUBUNIT) 10116
4 6AU6 1 A Guanine nucleotide-binding protein G(s) subunit alpha isoforms short UNP residues 7-380 9606
5 1TAD 1 A, B, C TRANSDUCIN-ALPHA 9913
6 1TAG 1 A TRANSDUCIN-ALPHA 9913
7 2ODE 1 A, C Guanine nucleotide-binding protein G(k) subunit alpha 9606
8 5KDO 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 10116
9 4PAO 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 10116
10 4PAQ 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 10116
11 6CRK 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 9606
12 1GIA 1 A G PROTEIN GI ALPHA 1 10116
13 3UMR 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 9606
14 1SVK 1 A Guanine nucleotide-binding protein G(i), alpha-1 subunit 10116 3.6.5.1 | Details
15 1AS0 1 A GIA1 GTP-GAMMA-S BOUND G42V GIA1 10116
16 1GOT 1 A GT-ALPHA/GI-ALPHA CHIMERA THIS IS A CHIMERIC PROTEIN WHERE RESIDUES 216-294 OF BOVINE GT ALPHA HAVE BEEN REPLACED WITH RESIDUES 220-298 OF RAT GI ALPHA 1 9913
17 1ZCB 1 A G alpha i/13 N-terminal residues 1-28 of G alpha i followed by residues 47-377 of G alpha 13 10090
18 4N0E 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 10116 3.6.5.1 | Details
19 1BH2 1 A GUANINE NUCLEOTIDE-BINDING PROTEIN 10116
20 4PAM 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 10116
21 1TND 1 A, B, C TRANSDUCIN 9913
22 1FQJ 1 A, D Guanine nucleotide-binding protein G(t) subunit alpha-1,Guanine nucleotide-binding protein G(i) subunit alpha-1,Guanine nucleotide-binding protein G(t) subunit alpha-1 THE CHIMERA COMPRISES RESIDUES 26 TO 215 OF BOVINE GT, RESIDUES 220 TO 298 OF RAT GI1, AND RESIDUES 295 TO 350 OF BOVINE GT UNP P04695 residues 26-215 and 295-350 linked via UNP P10824 residues 220-298 10116
23 3CX8 1 A Guanine nucleotide-binding protein alpha-13 subunit N-terminally truncated 10090
24 3FFA 1 A Guanine nucleotide-binding protein G(i), alpha-1 subunit 10116
25 3UMS 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 9606
26 1GDD 1 A GI ALPHA 1 INACTIVE FORM 10116
27 1GFI 1 A GUANINE NUCLEOTIDE-BINDING PROTEIN G 10116
28 4PAN 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 10116
29 2OM2 1 A, C Guanine nucleotide-binding protein G(i), alpha-1 subunit G{alpha}i1 9606
30 1BOF 1 A GI ALPHA 1 INACTIVE FORM 10116
31 1AZS 3 C GS-ALPHA 9913
32 1AZT 1 A, B GS-ALPHA 9913
33 2XTZ 1 A, B, C GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-1 SUBUNIT RESIDUES 37-383 3702 3.6.5.1 | Details
34 1GIL 1 A G PROTEIN GI ALPHA 1 10116
35 3AB3 1 A, C Guanine nucleotide-binding protein G(k) subunit alpha, Guanine nucleotide-binding protein subunit alpha-13 ONE FUSED PROTEIN IS MADE OF RESIDUES 1-28 OF G ALPHA I, LINKER, AND RESIDUES 47-377 OF G ALPHA 13 UNP RESIDUES 1-28 (G ALPHA I), UNP RESIDUES 47-377 (G ALPHA 13) 10090
36 1GG2 1 A G PROTEIN GI ALPHA 1 ALPHA 1 10116
37 1GP2 1 A G PROTEIN GI ALPHA 1 ALPHA 1 10116
38 3FFB 1 A Guanine nucleotide-binding protein G(i), alpha-1 subunit 10116
39 1AS3 1 A GIA1 GDP BOUND G42V GIA1 10116
40 5DO9 1 A, C, E Guanine nucleotide-binding protein G(q) subunit alpha Guanine nucleotide-binding protein G(q) subunit alpha 10090
41 1FQK 1 A, C Guanine nucleotide-binding protein G(t) subunit alpha-1,Guanine nucleotide-binding protein G(i) subunit alpha-1,Guanine nucleotide-binding protein G(t) subunit alpha-1 THE CHIMERA COMPRISES RESIDUES 26 TO 215 OF BOVINE GT, RESIDUES 220 TO 298 OF RAT GI1, AND RESIDUES 295 TO 350 OF BOVINE GT UNP P04695 residues 26-215 and 295-350 linked via UNP P10824 residues 220-298 10116
42 1GIT 1 A G PROTEIN GI ALPHA 1 STRUCTURE MIMICS THE TERNARY COMPLEX ALPHA 1 10116
43 1CUL 3 C GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) GS(ALPHA) 9913
44 3ONW 1 A, B Guanine nucleotide-binding protein G(i) subunit alpha-1 9606 3.6.5.1 | Details
45 4FID 1 A, B G protein alpha subunit UNP RESIDUES 22-358 5759
46 3CX7 1 A Guanine Nucleotide-Binding Protein Galpha 13 N-terminally truncated 10090
47 1CS4 3 C GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) GS(ALPHA) 9913
48 2ZJY 1 A Guanine nucleotide-binding protein G(i), alpha-1 subunit 10116 3.6.5.1 | Details
49 4EKD 1 A Guanine nucleotide-binding protein G(q) subunit alpha UNP residues 18-359 10090 3.6.5.1 | Details
50 1AS2 1 A GIA1 GDP+PI BOUND G42V GIA1 10116
51 2GTP 1 A, B Guanine nucleotide-binding protein G(i), alpha-1 subunit 9606
52 2ZJZ 1 A, B Guanine nucleotide-binding protein G(i), alpha-1 subunit 10116 3.6.5.1 | Details
53 3OHM 1 A Guanine nucleotide-binding protein G(q) subunit alpha unp residues 35-359 10090
54 5KDL 1 A, B Guanine nucleotide-binding protein G(i) subunit alpha-1 10116
55 2IHB 1 A Guanine nucleotide-binding protein G(k) subunit alpha 9606
56 3QI2 1 A, B Guanine nucleotide-binding protein G(i) subunit alpha-1 alpha-i1 subunit, residues 31-354 9606 3.6.5.1 | Details
57 1CJT 3 C GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) TRYPSINIZED FRAGMENT 9913
58 2V4Z 1 A GUANINE NUCLEOTIDE-BINDING PROTEIN G(K) SUBUNIT ALPHA SUBUNIT ALPHA, RESIDUES 4-350 9606
59 1Y3A 1 A, B, C, D Guanine nucleotide-binding protein G(i), alpha-1 subunit sequence database residues 25-353 9606
60 1AGR 1 A, D GUANINE NUCLEOTIDE-BINDING PROTEIN G(I) ALPHA-1 10116
61 4QJ3 1 A Guanine nucleotide-binding protein G(q) subunit alpha UNP residues 7-359 10090
62 4G5Q 1 A, B, C, D Guanine nucleotide-binding protein G(i) subunit alpha-1 UNP RESIDUES 25-354 9606
63 1CJU 3 C GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) TRYPSINIZED FRAGMENT 9913
64 4G5O 1 A, B, C, D Guanine nucleotide-binding protein G(k) subunit alpha UNP RESIDUES 25-354 9606
65 3CX6 1 A Guanine nucleotide-binding protein alpha-13 subunit N-terminally truncated 10090
66 2IK8 1 A, C Guanine nucleotide-binding protein G(i), alpha-1 subunit 9606
67 1KJY 1 A, C GUANINE NUCLEOTIDE-BINDING PROTEIN G(I), ALPHA-1 SUBUNIT 9606
68 1CJV 3 C GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) TRYPSINIZED FRAGMENT 9913
69 3C14 3 C Guanine nucleotide-binding protein G(s) subunit alpha isoforms short TRYPSINIZED FRAGMENT 9913
70 3V00 1 A, B, C Guanine nucleotide-binding protein G(t) subunit alpha-1/ Guanine nucleotide-binding protein G(i) subunit alpha-1 chimeric protein UNP P04695 1-215 & 295-350, UNP P10824 220-298 10116
71 1SHZ 1 A, D Guanine Nucleotide-Binding Protein Galpha(13):Galpha(i1) Chimera residues 21-47, 185-210, 213-230, 240-353 of Galpha(i1) and residues 64-207, 234-235, 254-262 of Galpha(13) 10116
72 3C15 3 C Guanine nucleotide-binding protein G(s) subunit alpha isoforms short TRYPSINIZED FRAGMENT 9913
73 1CJK 3 C GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) TRYPSINIZED FRAGMENT 9913
74 1ZCA 1 A, B G alpha i/12 N-terminal residues 1-28 of G alpha i followed by residues 49-379 of G alpha 12 10090
75 1TL7 3 C Guanine nucleotide-binding protein G(s), alpha subunit 9913
76 2GVD 3 C Guanine nucleotide-binding protein G(s), alpha subunit 9913
77 1U0H 3 C Guanine nucleotide-binding protein G(s), alpha subunit 9913
78 3C16 3 C Guanine nucleotide-binding protein G(s) subunit alpha isoforms short TRYPSINIZED FRAGMENT 9913
79 3D7M 1 A Guanine nucleotide-binding protein G(i), alpha-1 subunit 10116
80 3C7K 1 A, C Guanine nucleotide-binding protein G(o) subunit alpha Residues 22-354 10090
81 4QJ4 1 A Guanine nucleotide-binding protein G(q) subunit alpha UNP residues 7-359 10090
82 3MAA 3 C Guanine nucleotide-binding protein G(s) subunit alpha isoforms short 9913
83 2BCJ 4 Q Guanine nucleotide-binding protein G(i) subunit alpha-1, Guanine nucleotide-binding protein G(q) subunit alpha chimera 10116
84 3SN6 1 A Guanine nucleotide-binding protein G(s) subunit alpha isoforms short 9913
85 3QE0 1 A, B, C Guanine nucleotide-binding protein G(i) subunit alpha-1 alpha-i1 subunit, residues 33-354 9606 3.6.5.1 | Details
86 3AH8 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1/Guanine nucleotide-binding protein G(q) subunit alpha chimeric protein UNP entry P10824 residues 2-28, UNP entry P21279 residues 37-359 10116
87 3G82 3 C Guanine nucleotide-binding protein G(s) subunit alpha isoforms short TRYPSINIZED FRAGMENT OF G(S)ALPHA SUBUNIT 9913
88 4QJ5 1 A Guanine nucleotide-binding protein G(q) subunit alpha UNP residues 7-359 10090
89 4G5R 1 A, B, C, D Guanine nucleotide-binding protein G(k) subunit alpha UNP RESIDUES 25-354 9606
90 2XNS 1 A, B GUANINE NUCLEOTIDE-BINDING PROTEIN G(I) SUBUNIT ALPHA-1 RESIDUES 30-354 9606 3.6.5.1 | Details
91 4G5S 1 A, B, C, D Guanine nucleotide-binding protein G(k) subunit alpha UNP RESIDUES 25-354 9606
92 6FUF 2 B Guanine nucleotide-binding protein G(o) subunit alpha 9606
93 2G83 1 A, B Guanine nucleotide-binding protein G(i), alpha-1 subunit 9606
94 5TDH 1 A, H Guanine nucleotide-binding protein G(i) subunit alpha-1 9606
95 2RGN 1 A, D Guanine nucleotide-binding protein G(i) subunit alpha-1,Guanine nucleotide-binding protein G(q) subunit alpha Chimeric protein of rat Guanine nucleotide-binding protein G(i) subunit alpha-1 N-terminal helix residues 1-28 and mouse Guanine nucleotide-binding protein G(q) subunit alpha residues 31-353,Chimeric protein of rat Guanine nucleotide-binding protein G(i) 10116
96 4GNK 1 A, C Guanine nucleotide-binding protein G(q) subunit alpha UNP residues 7-359 10090
97 2GVZ 3 C Guanine nucleotide-binding protein G(s), alpha subunit 9913
98 5G53 2 C, D ENGINEERED DOMAIN OF HUMAN G ALPHA S LONG ISOFORM DELETIONS 1-25,65-203,255-264 INSERTION GGSGGSGG LINKING RESIDUES 64 AND 204 RAS DOMAIN, RESIDUES 26-60 AND 847-1037 9606
99 4EKC 1 A, C Guanine nucleotide-binding protein G(q) subunit alpha UNP residues 18-359 10090 3.6.5.1 | Details
100 6E3Y 3 A Guanine nucleotide-binding protein G(s) subunit alpha isoforms short 9606
101 6DDE 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 9606
102 6DDF 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 9606
103 6D9H 1 A Guanine nucleotide-binding protein G(i) subunit alpha-2 9606
104 6GDG 4 D Guanine nucleotide-binding protein G(s) subunit alpha isoforms short,Guanine nucleotide-binding protein G(s) subunit alpha isoforms short 9606
105 6G79 3 A Guanine nucleotide-binding protein G(o) subunit alpha 9606
106 6CMO 2 A Guanine nucleotide-binding protein G(i) subunit alpha-1 9606
107 6B3J 3 A Guanine nucleotide-binding protein G(s) subunit alpha isoforms short 9606
108 5VAI 3 A Guanine nucleotide-binding protein G(s) subunit alpha isoforms short UNP residuews 1-380 9606
109 5UZ7 1 A Guanine nucleotide-binding protein G(s) subunit alpha isoforms short 9606
110 5JS7 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 9606
111 5JS8 1 A Guanine nucleotide-binding protein G(i) subunit alpha-1 9606