Sequence Similarity Clusters for the Entities in PDB 1CJU

Entity #1 | Chains: A
ADENYLATE CYCLASE, TYPE V protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 16 3821
95 % 5 16 4188 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 5 16 4237
70 % 5 16 4156
50 % 5 16 4024
40 % 5 16 3818
30 % 5 16 3493
Entity #2 | Chains: B
ADENYLATE CYCLASE, TYPE II protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 17 3480
95 % 6 17 3790 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.8
PDBFlex
90 % 6 17 3858
70 % 6 17 3775
50 % 6 17 3680
40 % 6 17 3511
30 % 16 27 1289
Entity #3 | Chains: C
GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) protein, length: 402 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 16 3632
95 % 7 22 2846 Flexibility: Low
Max RMSD: 18.4, Avg RMSD: 2.4
PDBFlex
90 % 7 22 2960
70 % 7 22 2920
50 % 60 106 370
40 % 62 108 384
30 % 62 108 385

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1AB8 1 A, B ADENYLYL CYCLASE C2 DOMAIN 10116 4.6.1.1 | Details
2 1AZS 2 B IIC2 C2A DOMAIN OF ADENYLYL CYCLASE 10116 4.6.1.1 | Details
3 1CUL 2 B TYPE II ADENYLYL CYCLASE C2A DOMAIN 10116 4.6.1.1 | Details
4 1CS4 2 B TYPE II ADENYLATE CYCLASE C2A DOMAIN 10116 4.6.1.1 | Details
5 1CJT 2 B ADENYLATE CYCLASE, TYPE II C2A DOMAIN OF ADENYLYL CYCLASE 10116 4.6.1.1 | Details
6 1CJU 2 B ADENYLATE CYCLASE, TYPE II C2A DOMAIN OF ADENYLYL CYCLASE 10116 4.6.1.1 | Details
7 1CJV 2 B ADENYLATE CYCLASE, TYPE II C2A DOMAIN OF ADENYLYL CYCLASE 10116 4.6.1.1 | Details
8 3C14 2 B Adenylate cyclase type 2 C2A DOMAIN 10116 4.6.1.1 | Details
9 3C15 2 B Adenylate cyclase type 2 C2A DOMAIN 10116 4.6.1.1 | Details
10 1CJK 2 B ADENYLATE CYCLASE, TYPE II C2A DOMAIN OF ADENYLYL CYCLASE 10116 4.6.1.1 | Details
11 1TL7 2 B Adenylate cyclase, type II C2A Domain Of Adenylyl Cyclase 10116 4.6.1.1 | Details
12 2GVD 2 B Adenylate cyclase type 2 C2A domain, residues 870-1081 10116 4.6.1.1 | Details
13 1U0H 2 B Adenylate cyclase, type II C2A domain of Adenylyl Cyclase 10116 4.6.1.1 | Details
14 3C16 2 B Adenylate cyclase type 2 C2A DOMAIN 10116 4.6.1.1 | Details
15 3MAA 2 B Adenylate cyclase type 2 C2A DOMAIN 10116 4.6.1.1 | Details
16 3G82 2 B Adenylate cyclase type 2 C2A DOMAIN 10116 4.6.1.1 | Details
17 2GVZ 2 B Adenylate cyclase type 2 C2A DOMAIN, residues 870-1081 10116 4.6.1.1 | Details