Sequence Similarity Clusters for the Entities in PDB 1CJU

Entity #1 | Chains: A
ADENYLATE CYCLASE, TYPE V protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 16 3386
95 % 5 16 4160 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 5 16 4193
70 % 5 16 4127
50 % 5 16 3975
40 % 5 16 3798
30 % 5 16 3538
Entity #2 | Chains: B
ADENYLATE CYCLASE, TYPE II protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 17 2876
95 % 6 17 3573 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.8
PDBFlex
90 % 6 17 3625
70 % 6 17 3573
50 % 6 17 3475
40 % 6 17 3358
30 % 15 26 1837
Entity #3 | Chains: C
GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) protein, length: 402 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 14709
95 % 6 20 2929 Flexibility: Low
Max RMSD: 18.4, Avg RMSD: 2.4
PDBFlex
90 % 6 20 2975
70 % 6 20 2939
50 % 6 20 2899
40 % 59 97 380
30 % 61 99 363

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1AB8 1 A, B ADENYLYL CYCLASE C2 DOMAIN 10116 4.6.1.1 | Details
2 1AZS 2 B IIC2 C2A DOMAIN OF ADENYLYL CYCLASE 10116 4.6.1.1 | Details
3 1CUL 2 B TYPE II ADENYLYL CYCLASE C2A DOMAIN 10116 4.6.1.1 | Details
4 1CS4 2 B TYPE II ADENYLATE CYCLASE C2A DOMAIN 10116 4.6.1.1 | Details
5 1CJT 2 B ADENYLATE CYCLASE, TYPE II C2A DOMAIN OF ADENYLYL CYCLASE 10116 4.6.1.1 | Details
6 1CJU 2 B ADENYLATE CYCLASE, TYPE II C2A DOMAIN OF ADENYLYL CYCLASE 10116 4.6.1.1 | Details
7 1CJV 2 B ADENYLATE CYCLASE, TYPE II C2A DOMAIN OF ADENYLYL CYCLASE 10116 4.6.1.1 | Details
8 3C14 2 B Adenylate cyclase type 2 C2A DOMAIN 10116 4.6.1.1 | Details
9 3C15 2 B Adenylate cyclase type 2 C2A DOMAIN 10116 4.6.1.1 | Details
10 1CJK 2 B ADENYLATE CYCLASE, TYPE II C2A DOMAIN OF ADENYLYL CYCLASE 10116 4.6.1.1 | Details
11 1TL7 2 B Adenylate cyclase, type II C2A Domain Of Adenylyl Cyclase 10116 4.6.1.1 | Details
12 2GVD 2 B Adenylate cyclase type 2 C2A domain, residues 870-1081 10116 4.6.1.1 | Details
13 1U0H 2 B Adenylate cyclase, type II C2A domain of Adenylyl Cyclase 10116 4.6.1.1 | Details
14 3C16 2 B Adenylate cyclase type 2 C2A DOMAIN 10116 4.6.1.1 | Details
15 3MAA 2 B Adenylate cyclase type 2 C2A DOMAIN 10116 4.6.1.1 | Details
16 3G82 2 B Adenylate cyclase type 2 C2A DOMAIN 10116 4.6.1.1 | Details
17 2GVZ 2 B Adenylate cyclase type 2 C2A DOMAIN, residues 870-1081 10116 4.6.1.1 | Details